Daily Papers

Recent advances in large language model (LLM) reasoning through reinforcement learning rely on annotated datasets for verifiable rewards, which may limit models' ability to surpass human-level performance. While self-play offers a promising alternative, existing approaches depend on external verifiers or cannot learn open-endedly. We present Open-Ended Self-Improving Reasoner (OpenSIR), a self-play framework where an LLM learns to generate and solve novel problems by alternating teacher and student roles without external supervision. To generate novel problems, OpenSIR optimises for both difficulty and diversity, rewarding problems that challenge appropriately while exploring distinct concepts, enabling open-ended mathematical discovery. Starting from a single trivial seed problem, OpenSIR substantially improves instruction models: Llama-3.2-3B-Instruct advances from 73.9 to 78.3 on GSM8K, and from 28.8 to 34.4 on College Math, while Gemma-2-2B-Instruct rises from 38.5 to 58.7 on GSM8K. Our analyses reveal that OpenSIR achieves open-ended learning through co-evolving teacher-student roles that adaptively calibrate difficulty and drive diverse exploration, progressing autonomously from basic to advanced mathematics.

Personality manipulation in large language models (LLMs) is increasingly applied in customer service and agentic scenarios, yet its mechanisms and trade-offs remain unclear. We present a systematic study of personality control using the Big Five traits, comparing in-context learning (ICL), parameter-efficient fine-tuning (PEFT), and mechanistic steering (MS). Our contributions are fourfold. First, we construct a contrastive dataset with balanced high/low trait responses, enabling effective steering vector computation and fair cross-method evaluation. Second, we introduce a unified evaluation framework based on within-run Delta analysis that disentangles, reasoning capability, agent performance, and demographic bias across MMLU, GAIA, and BBQ benchmarks. Third, we develop trait purification techniques to separate openness from conscientiousness, addressing representational overlap in trait encoding. Fourth, we propose a three-level stability framework that quantifies method-, trait-, and combination-level robustness, offering practical guidance under deployment constraints. Experiments on Gemma-2-2B-IT and LLaMA-3-8B-Instruct reveal clear trade-offs: ICL achieves strong alignment with minimal capability loss, PEFT delivers the highest alignment at the cost of degraded task performance, and MS provides lightweight runtime control with competitive effectiveness. Trait-level analysis shows openness as uniquely challenging, agreeableness as most resistant to ICL, and personality encoding consolidating around intermediate layers. Taken together, these results establish personality manipulation as a multi-level probe into behavioral representation, linking surface conditioning, parameter encoding, and activation-level steering, and positioning mechanistic steering as a lightweight alternative to fine-tuning for both deployment and interpretability.

The growing capabilities of large language models in natural language understanding significantly strengthen existing agentic systems. To power performant on-device mobile agents for better data privacy, we introduce DroidCall, the first training and testing dataset for accurate Android intent invocation. With a highly flexible and reusable data generation pipeline, we constructed 10k samples in DroidCall. Given a task instruction in natural language, small language models such as Qwen2.5-3B and Gemma2-2B fine-tuned with DroidCall can approach or even surpass the capabilities of GPT-4o for accurate Android intent invocation. We also provide an end-to-end Android app equipped with these fine-tuned models to demonstrate the Android intent invocation process. The code and dataset are available at https://github.com/UbiquitousLearning/DroidCall.

Sparse autoencoders (SAEs) are an unsupervised method for learning a sparse decomposition of a neural network's latent representations into seemingly interpretable features. Despite recent excitement about their potential, research applications outside of industry are limited by the high cost of training a comprehensive suite of SAEs. In this work, we introduce Gemma Scope, an open suite of JumpReLU SAEs trained on all layers and sub-layers of Gemma 2 2B and 9B and select layers of Gemma 2 27B base models. We primarily train SAEs on the Gemma 2 pre-trained models, but additionally release SAEs trained on instruction-tuned Gemma 2 9B for comparison. We evaluate the quality of each SAE on standard metrics and release these results. We hope that by releasing these SAE weights, we can help make more ambitious safety and interpretability research easier for the community. Weights and a tutorial can be found at https://huggingface.co/google/gemma-scope and an interactive demo can be found at https://www.neuronpedia.org/gemma-scope

While decoder-only large language models (LLMs) have shown impressive results, encoder-decoder models are still widely adopted in real-world applications for their inference efficiency and richer encoder representation. In this paper, we study a novel problem: adapting pretrained decoder-only LLMs to encoder-decoder, with the goal of leveraging the strengths of both approaches to achieve a more favorable quality-efficiency trade-off. We argue that adaptation not only enables inheriting the capability of decoder-only LLMs but also reduces the demand for computation compared to pretraining from scratch. We rigorously explore different pretraining objectives and parameter initialization/optimization techniques. Through extensive experiments based on Gemma 2 (2B and 9B) and a suite of newly pretrained mT5-sized models (up to 1.6B), we demonstrate the effectiveness of adaptation and the advantage of encoder-decoder LLMs. Under similar inference budget, encoder-decoder LLMs achieve comparable (often better) pretraining performance but substantially better finetuning performance than their decoder-only counterpart. For example, Gemma 2B-2B outperforms Gemma 2B by sim7\% after instruction tuning. Encoder-decoder adaptation also allows for flexible combination of different-sized models, where Gemma 9B-2B significantly surpasses Gemma 2B-2B by >3\%. The adapted encoder representation also yields better results on SuperGLUE. We will release our checkpoints to facilitate future research.

As language models grow ever larger, so do their vocabularies. This has shifted the memory footprint of LLMs during training disproportionately to one single layer: the cross-entropy in the loss computation. Cross-entropy builds up a logit matrix with entries for each pair of input tokens and vocabulary items and, for small models, consumes an order of magnitude more memory than the rest of the LLM combined. We propose Cut Cross-Entropy (CCE), a method that computes the cross-entropy loss without materializing the logits for all tokens into global memory. Rather, CCE only computes the logit for the correct token and evaluates the log-sum-exp over all logits on the fly. We implement a custom kernel that performs the matrix multiplications and the log-sum-exp reduction over the vocabulary in flash memory, making global memory consumption for the cross-entropy computation negligible. This has a dramatic effect. Taking the Gemma 2 (2B) model as an example, CCE reduces the memory footprint of the loss computation from 24 GB to 1 MB, and the total training-time memory consumption of the classifier head from 28 GB to 1 GB. To improve the throughput of CCE, we leverage the inherent sparsity of softmax and propose to skip elements of the gradient computation that have a negligible (i.e., below numerical precision) contribution to the gradient. Experiments demonstrate that the dramatic reduction in memory consumption is accomplished without sacrificing training speed or convergence.

Sparse Autoencoders (SAEs) have proven to be powerful tools for interpreting neural networks by decomposing hidden representations into disentangled, interpretable features via sparsity constraints. However, conventional SAEs are constrained by the fixed sparsity level chosen during training; meeting different sparsity requirements therefore demands separate models and increases the computational footprint during both training and evaluation. We introduce a novel training objective, HierarchicalTopK, which trains a single SAE to optimise reconstructions across multiple sparsity levels simultaneously. Experiments with Gemma-2 2B demonstrate that our approach achieves Pareto-optimal trade-offs between sparsity and explained variance, outperforming traditional SAEs trained at individual sparsity levels. Further analysis shows that HierarchicalTopK preserves high interpretability scores even at higher sparsity. The proposed objective thus closes an important gap between flexibility and interpretability in SAE design.

Model diffing is the study of how fine-tuning changes a model's representations and internal algorithms. Many behaviors of interest are introduced during fine-tuning, and model diffing offers a promising lens to interpret such behaviors. Crosscoders are a recent model diffing method that learns a shared dictionary of interpretable concepts represented as latent directions in both the base and fine-tuned models, allowing us to track how concepts shift or emerge during fine-tuning. Notably, prior work has observed concepts with no direction in the base model, and it was hypothesized that these model-specific latents were concepts introduced during fine-tuning. However, we identify two issues which stem from the crosscoders L1 training loss that can misattribute concepts as unique to the fine-tuned model, when they really exist in both models. We develop Latent Scaling to flag these issues by more accurately measuring each latent's presence across models. In experiments comparing Gemma 2 2B base and chat models, we observe that the standard crosscoder suffers heavily from these issues. Building on these insights, we train a crosscoder with BatchTopK loss and show that it substantially mitigates these issues, finding more genuinely chat-specific and highly interpretable concepts. We recommend practitioners adopt similar techniques. Using the BatchTopK crosscoder, we successfully identify a set of chat-specific latents that are both interpretable and causally effective, representing concepts such as false information and personal question, along with multiple refusal-related latents that show nuanced preferences for different refusal triggers. Overall, our work advances best practices for the crosscoder-based methodology for model diffing and demonstrates that it can provide concrete insights into how chat-tuning modifies model behavior.

Understanding the internal representations of large language models is crucial for ensuring their reliability and safety, with sparse autoencoders (SAEs) emerging as a promising interpretability approach. However, current SAE training methods face feature absorption, where features (or neurons) are absorbed into each other to minimize L_1 penalty, making it difficult to consistently identify and analyze model behaviors. We introduce Adaptive Temporal Masking (ATM), a novel training approach that dynamically adjusts feature selection by tracking activation magnitudes, frequencies, and reconstruction contributions to compute importance scores that evolve over time. ATM applies a probabilistic masking mechanism based on statistical thresholding of these importance scores, creating a more natural feature selection process. Through extensive experiments on the Gemma-2-2b model, we demonstrate that ATM achieves substantially lower absorption scores compared to existing methods like TopK and JumpReLU SAEs, while maintaining excellent reconstruction quality. These results establish ATM as a principled solution for learning stable, interpretable features in neural networks, providing a foundation for more reliable model analysis.

Sparse autoencoders (SAEs) have emerged as a powerful tool for interpreting neural networks by extracting the concepts represented in their activations. However, choosing the size of the SAE dictionary (i.e. number of learned concepts) creates a tension: as dictionary size increases to capture more relevant concepts, sparsity incentivizes features to be split or absorbed into more specific features, leaving high-level features missing or warped. We introduce Matryoshka SAEs, a novel variant that addresses these issues by simultaneously training multiple nested dictionaries of increasing size, forcing the smaller dictionaries to independently reconstruct the inputs without using the larger dictionaries. This organizes features hierarchically - the smaller dictionaries learn general concepts, while the larger dictionaries learn more specific concepts, without incentive to absorb the high-level features. We train Matryoshka SAEs on Gemma-2-2B and TinyStories and find superior performance on sparse probing and targeted concept erasure tasks, more disentangled concept representations, and reduced feature absorption. While there is a minor tradeoff with reconstruction performance, we believe Matryoshka SAEs are a superior alternative for practical tasks, as they enable training arbitrarily large SAEs while retaining interpretable features at different levels of abstraction.

Humans distill complex experiences into fundamental abstractions that enable rapid learning and adaptation. Similarly, autoregressive transformers exhibit adaptive learning through in-context learning (ICL), which begs the question of how. In this paper, we propose concept encoding-decoding mechanism to explain ICL by studying how transformers form and use internal abstractions in their representations. On synthetic ICL tasks, we analyze the training dynamics of a small transformer and report the coupled emergence of concept encoding and decoding. As the model learns to encode different latent concepts (e.g., ``Finding the first noun in a sentence.") into distinct, separable representations, it concureently builds conditional decoding algorithms and improve its ICL performance. We validate the existence of this mechanism across pretrained models of varying scales (Gemma-2 2B/9B/27B, Llama-3.1 8B/70B). Further, through mechanistic interventions and controlled finetuning, we demonstrate that the quality of concept encoding is causally related and predictive of ICL performance. Our empirical insights shed light into better understanding the success and failure modes of large language models via their representations.

Large language models (LLMs) are now ubiquitous in user-facing applications, yet they still generate undesirable toxic outputs, including profanity, vulgarity, and derogatory remarks. Although numerous detoxification methods exist, most apply broad, surface-level fixes and can therefore easily be circumvented by jailbreak attacks. In this paper we leverage sparse autoencoders (SAEs) to identify toxicity-related directions in the residual stream of models and perform targeted activation steering using the corresponding decoder vectors. We introduce three tiers of steering aggressiveness and evaluate them on GPT-2 Small and Gemma-2-2B, revealing trade-offs between toxicity reduction and language fluency. At stronger steering strengths, these causal interventions surpass competitive baselines in reducing toxicity by up to 20%, though fluency can degrade noticeably on GPT-2 Small depending on the aggressiveness. Crucially, standard NLP benchmark scores upon steering remain stable, indicating that the model's knowledge and general abilities are preserved. We further show that feature-splitting in wider SAEs hampers safety interventions, underscoring the importance of disentangled feature learning. Our findings highlight both the promise and the current limitations of SAE-based causal interventions for LLM detoxification, further suggesting practical guidelines for safer language-model deployment.

Sparse autoencoders (SAEs) have emerged as a powerful tool for interpreting language model activations by decomposing them into sparse, interpretable features. A popular approach is the TopK SAE, that uses a fixed number of the most active latents per sample to reconstruct the model activations. We introduce BatchTopK SAEs, a training method that improves upon TopK SAEs by relaxing the top-k constraint to the batch-level, allowing for a variable number of latents to be active per sample. As a result, BatchTopK adaptively allocates more or fewer latents depending on the sample, improving reconstruction without sacrificing average sparsity. We show that BatchTopK SAEs consistently outperform TopK SAEs in reconstructing activations from GPT-2 Small and Gemma 2 2B, and achieve comparable performance to state-of-the-art JumpReLU SAEs. However, an advantage of BatchTopK is that the average number of latents can be directly specified, rather than approximately tuned through a costly hyperparameter sweep. We provide code for training and evaluating BatchTopK SAEs at https://github.com/bartbussmann/BatchTopK

Low-resource languages face significant challenges due to the lack of sufficient linguistic data, resources, and tools for tasks such as supervised learning, annotation, and classification. This shortage hinders the development of accurate models and datasets, making it difficult to perform critical NLP tasks like sentiment analysis or hate speech detection. To bridge this gap, Large Language Models (LLMs) present an opportunity for potential annotators, capable of generating datasets and resources for these underrepresented languages. In this paper, we focus on Marathi, a low-resource language, and evaluate the performance of both closed-source and open-source LLMs as annotators. We assess models such as GPT-4o and Gemini 1.0 Pro, Gemma 2 (2B and 9B), and Llama 3.1 (8B) on classification tasks including sentiment analysis, news classification, and hate speech detection. Our findings reveal that while LLMs excel in annotation tasks for high-resource languages like English, they still fall short when applied to Marathi. Even advanced closed models like Gemini and GPT underperform in comparison to BERT-based baselines, highlighting the limitations of LLMs as annotators for low-resource languages.

Sparse Autoencoders (SAEs) provide potentials for uncovering structured, human-interpretable representations in Large Language Models (LLMs), making them a crucial tool for transparent and controllable AI systems. We systematically analyze SAE for interpretable feature extraction from LLMs in safety-critical classification tasks. Our framework evaluates (1) model-layer selection and scaling properties, (2) SAE architectural configurations, including width and pooling strategies, and (3) the effect of binarizing continuous SAE activations. SAE-derived features achieve macro F1 > 0.8, outperforming hidden-state and BoW baselines while demonstrating cross-model transfer from Gemma 2 2B to 9B-IT models. These features generalize in a zero-shot manner to cross-lingual toxicity detection and visual classification tasks. Our analysis highlights the significant impact of pooling strategies and binarization thresholds, showing that binarization offers an efficient alternative to traditional feature selection while maintaining or improving performance. These findings establish new best practices for SAE-based interpretability and enable scalable, transparent deployment of LLMs in real-world applications. Full repo: https://github.com/shan23chen/MOSAIC.

We investigate whether sparse autoencoders (SAEs) can be used to remove knowledge from language models. We use the biology subset of the Weapons of Mass Destruction Proxy dataset and test on the gemma-2b-it and gemma-2-2b-it language models. We demonstrate that individual interpretable biology-related SAE features can be used to unlearn a subset of WMDP-Bio questions with minimal side-effects in domains other than biology. Our results suggest that negative scaling of feature activations is necessary and that zero ablating features is ineffective. We find that intervening using multiple SAE features simultaneously can unlearn multiple different topics, but with similar or larger unwanted side-effects than the existing Representation Misdirection for Unlearning technique. Current SAE quality or intervention techniques would need to improve to make SAE-based unlearning comparable to the existing fine-tuning based techniques.

Artificial Text Detection (ATD) is becoming increasingly important with the rise of advanced Large Language Models (LLMs). Despite numerous efforts, no single algorithm performs consistently well across different types of unseen text or guarantees effective generalization to new LLMs. Interpretability plays a crucial role in achieving this goal. In this study, we enhance ATD interpretability by using Sparse Autoencoders (SAE) to extract features from Gemma-2-2b residual stream. We identify both interpretable and efficient features, analyzing their semantics and relevance through domain- and model-specific statistics, a steering approach, and manual or LLM-based interpretation. Our methods offer valuable insights into how texts from various models differ from human-written content. We show that modern LLMs have a distinct writing style, especially in information-dense domains, even though they can produce human-like outputs with personalized prompts.

Quantizing model weights is critical for reducing the communication and inference costs of large models. However, quantizing models -- especially to low precisions like int4 or int2 -- requires a trade-off in model quality; int2, in particular, is known to severely degrade model quality. Consequently, practitioners are often forced to maintain multiple models with different quantization levels or serve a single model that best satisfies the quality-latency trade-off. On the other hand, integer data types, such as int8, inherently possess a nested (Matryoshka) structure where smaller bit-width integers, like int4 or int2, are nested within the most significant bits. This paper proposes Matryoshka Quantization (MatQuant), a novel multi-scale quantization technique that addresses the challenge of needing multiple quantized models. It allows training and maintaining just one model, which can then be served at different precision levels. Furthermore, due to the co-training and co-distillation regularization provided by MatQuant, the int2 precision models extracted by MatQuant can be up to 10% more accurate than standard int2 quantization (using techniques like QAT or OmniQuant). This represents significant progress in model quantization, demonstrated by the fact that, with the same recipe, an int2 FFN-quantized Gemma-2 9B model is more accurate than an int8 FFN-quantized Gemma-2 2B model.

Sparse Autoencoders (SAEs) can extract interpretable features from large language models (LLMs) without supervision. However, their effectiveness in downstream steering tasks is limited by the requirement for contrastive datasets or large activation storage. To address these limitations, we propose CorrSteer, which selects features by correlating sample correctness with SAE activations from generated tokens at inference time. This approach uses only inference-time activations to extract more relevant features, thereby avoiding spurious correlations. It also obtains steering coefficients from average activations, automating the entire pipeline. Our method shows improved task performance on QA, bias mitigation, jailbreaking prevention, and reasoning benchmarks on Gemma 2 2B and LLaMA 3.1 8B, notably achieving a +4.1% improvement in MMLU performance and a +22.9% improvement in HarmBench with only 4000 samples. Selected features demonstrate semantically meaningful patterns aligned with each task's requirements, revealing the underlying capabilities that drive performance. Our work establishes correlationbased selection as an effective and scalable approach for automated SAE steering across language model applications.

Evaluating large language models (LLMs) in diverse and challenging scenarios is essential to align them with human preferences. To mitigate the prohibitive costs associated with human evaluations, utilizing a powerful LLM as a judge has emerged as a favored approach. Nevertheless, this methodology encounters several challenges, including substantial expenses, concerns regarding privacy and security, and reproducibility. In this paper, we propose a straightforward, replicable, and accurate automated evaluation method by leveraging a lightweight LLM as the judge, named RocketEval. Initially, we identify that the performance disparity between lightweight and powerful LLMs in evaluation tasks primarily stems from their ability to conduct comprehensive analyses, which is not easily enhanced through techniques such as chain-of-thought reasoning. By reframing the evaluation task as a multi-faceted Q&A using an instance-specific checklist, we demonstrate that the limited judgment accuracy of lightweight LLMs is largely attributes to high uncertainty and positional bias. To address these challenges, we introduce an automated evaluation process grounded in checklist grading, which is designed to accommodate a variety of scenarios and questions. This process encompasses the creation of checklists, the grading of these checklists by lightweight LLMs, and the reweighting of checklist items to align with the supervised annotations. Our experiments carried out on the automated evaluation benchmarks, MT-Bench and WildBench datasets, reveal that RocketEval, when using Gemma-2-2B as the judge, achieves a high correlation (0.965) with human preferences, which is comparable to GPT-4o. Moreover, RocketEval provides a cost reduction exceeding 50-fold for large-scale evaluation and comparison scenarios. Our code is available at https://github.com/Joinn99/RocketEval-ICLR .

Evolution, the engine behind the survival and growth of life on Earth, operates through the population-based process of reproduction. Inspired by this principle, this paper formally defines a newly emerging problem -- the population-based evolution of large language models (LLMs) -- and introduces a novel framework. Starting with a population of parent LLMs, our framework enables the population to evolve through four key operations: (i) crossover, merging the weights of different parents to create offspring LLMs, (ii) mutation, introducing small, random changes to model weights to foster diversity, (iii) selection, prioritizing high-performing models, and (iv) succession, transferring the learned experience from parent to offspring LLMs. With only 200 samples per new task, the LLM population evolves rapidly to adapt to the task at hand, without any gradients. Experiments on 12 datasets show that our framework consistently outperforms existing multi-LLM merging and adaptation methods, achieving accuracy gains of up to 54.8% over the best LLM in the initial population. Moreover, our framework allows for the evolution of LLMs across multiple new tasks simultaneously, scaling effectively with populations of up to 40 LLMs, and even zero-shot generalization to unseen held-out tasks. We have open-sourced the code on GitHub and released the weights of 10 parent LLMs, fine-tuned from gemma-2-2b-it, on HuggingFace$, enabling reproduction of our proposed framework using just a single 4090 GPU with 24GB memory, without any performance degradation.

Fine-grained steering of language model outputs is essential for safety and reliability. Prompting and finetuning are widely used to achieve these goals, but interpretability researchers have proposed a variety of representation-based techniques as well, including sparse autoencoders (SAEs), linear artificial tomography, supervised steering vectors, linear probes, and representation finetuning. At present, there is no benchmark for making direct comparisons between these proposals. Therefore, we introduce AxBench, a large-scale benchmark for steering and concept detection, and report experiments on Gemma-2-2B and 9B. For steering, we find that prompting outperforms all existing methods, followed by finetuning. For concept detection, representation-based methods such as difference-in-means, perform the best. On both evaluations, SAEs are not competitive. We introduce a novel weakly-supervised representational method (Rank-1 Representation Finetuning; ReFT-r1), which is competitive on both tasks while providing the interpretability advantages that prompting lacks. Along with AxBench, we train and publicly release SAE-scale feature dictionaries for ReFT-r1 and DiffMean.

Understanding the internal representations of large language models (LLMs) remains a central challenge for interpretability research. Sparse autoencoders (SAEs) offer a promising solution by decomposing activations into interpretable features, but existing approaches rely on fixed sparsity constraints that fail to account for input complexity. We propose Adaptive Top K Sparse Autoencoders (AdaptiveK), a novel framework that dynamically adjusts sparsity levels based on the semantic complexity of each input. Leveraging linear probes, we demonstrate that context complexity is linearly encoded in LLM representations, and we use this signal to guide feature allocation during training. Experiments across three language models (Pythia-70M, Pythia-160M, and Gemma-2-2B) demonstrate that this complexity-driven adaptation significantly outperforms fixed-sparsity approaches on reconstruction fidelity, explained variance, and cosine similarity metrics while eliminating the computational burden of extensive hyperparameter tuning.

Contextual hallucinations -- statements unsupported by given context -- remain a significant challenge in AI. We demonstrate a practical interpretability insight: a generator-agnostic observer model detects hallucinations via a single forward pass and a linear probe on its residual stream. This probe isolates a single, transferable linear direction separating hallucinated from faithful text, outperforming baselines by 5-27 points and showing robust mid-layer performance across Gemma-2 models (2B to 27B). Gradient-times-activation localises this signal to sparse, late-layer MLP activity. Critically, manipulating this direction causally steers generator hallucination rates, proving its actionability. Our results offer novel evidence of internal, low-dimensional hallucination tracking linked to specific MLP sub-circuits, exploitable for detection and mitigation. We release the 2000-example ContraTales benchmark for realistic assessment of such solutions.

In this work, we introduce Gemma 2, a new addition to the Gemma family of lightweight, state-of-the-art open models, ranging in scale from 2 billion to 27 billion parameters. In this new version, we apply several known technical modifications to the Transformer architecture, such as interleaving local-global attentions (Beltagy et al., 2020a) and group-query attention (Ainslie et al., 2023). We also train the 2B and 9B models with knowledge distillation (Hinton et al., 2015) instead of next token prediction. The resulting models deliver the best performance for their size, and even offer competitive alternatives to models that are 2-3 times bigger. We release all our models to the community.

PaliGemma 2 is an upgrade of the PaliGemma open Vision-Language Model (VLM) based on the Gemma 2 family of language models. We combine the SigLIP-So400m vision encoder that was also used by PaliGemma with the whole range of Gemma 2 models, from the 2B one all the way up to the 27B model. We train these models at three resolutions (224px, 448px, and 896px) in multiple stages to equip them with broad knowledge for transfer via fine-tuning. The resulting family of base models covering different model sizes and resolutions allows us to investigate factors impacting transfer performance (such as learning rate) and to analyze the interplay between the type of task, model size, and resolution. We further increase the number and breadth of transfer tasks beyond the scope of PaliGemma including different OCR-related tasks such as table structure recognition, molecular structure recognition, music score recognition, as well as long fine-grained captioning and radiography report generation, on which PaliGemma 2 obtains state-of-the-art results.

Therapeutic development is a costly and high-risk endeavor that is often plagued by high failure rates. To address this, we introduce TxGemma, a suite of efficient, generalist large language models (LLMs) capable of therapeutic property prediction as well as interactive reasoning and explainability. Unlike task-specific models, TxGemma synthesizes information from diverse sources, enabling broad application across the therapeutic development pipeline. The suite includes 2B, 9B, and 27B parameter models, fine-tuned from Gemma-2 on a comprehensive dataset of small molecules, proteins, nucleic acids, diseases, and cell lines. Across 66 therapeutic development tasks, TxGemma achieved superior or comparable performance to the state-of-the-art generalist model on 64 (superior on 45), and against state-of-the-art specialist models on 50 (superior on 26). Fine-tuning TxGemma models on therapeutic downstream tasks, such as clinical trial adverse event prediction, requires less training data than fine-tuning base LLMs, making TxGemma suitable for data-limited applications. Beyond these predictive capabilities, TxGemma features conversational models that bridge the gap between general LLMs and specialized property predictors. These allow scientists to interact in natural language, provide mechanistic reasoning for predictions based on molecular structure, and engage in scientific discussions. Building on this, we further introduce Agentic-Tx, a generalist therapeutic agentic system powered by Gemini 2.5 that reasons, acts, manages diverse workflows, and acquires external domain knowledge. Agentic-Tx surpasses prior leading models on the Humanity's Last Exam benchmark (Chemistry & Biology) with 52.3% relative improvement over o3-mini (high) and 26.7% over o3-mini (high) on GPQA (Chemistry) and excels with improvements of 6.3% (ChemBench-Preference) and 2.4% (ChemBench-Mini) over o3-mini (high).

We present Fox-1, a series of small language models (SLMs) consisting of Fox-1-1.6B and Fox-1-1.6B-Instruct-v0.1. These models are pre-trained on 3 trillion tokens of web-scraped document data and fine-tuned with 5 billion tokens of instruction-following and multi-turn conversation data. Aiming to improve the pre-training efficiency, Fox-1-1.6B model introduces a novel 3-stage data curriculum across all the training data with 2K-8K sequence length. In architecture design, Fox-1 features a deeper layer structure, an expanded vocabulary, and utilizes Grouped Query Attention (GQA), offering a performant and efficient architecture compared to other SLMs. Fox-1 achieves better or on-par performance in various benchmarks compared to StableLM-2-1.6B, Gemma-2B, Qwen1.5-1.8B, and OpenELM1.1B, with competitive inference speed and throughput. The model weights have been released under the Apache 2.0 license, where we aim to promote the democratization of LLMs and make them fully accessible to the whole open-source community.

Software vulnerabilities such as buffer overflows and SQL injections are a major source of security breaches. Traditional methods for vulnerability detection remain essential but are limited by high false positive rates, scalability issues, and reliance on manual effort. These constraints have driven interest in AI-based approaches to automated vulnerability detection and secure code generation. While Large Language Models (LLMs) have opened new avenues for classification tasks, their complexity and opacity pose challenges for interpretability and deployment. Sparse Autoencoder offer a promising solution to this problem. We explore whether SAEs can serve as a lightweight, interpretable alternative for bug detection in Java functions. We evaluate the effectiveness of SAEs when applied to representations from GPT-2 Small and Gemma 2B, examining their capacity to highlight buggy behaviour without fine-tuning the underlying LLMs. We found that SAE-derived features enable bug detection with an F1 score of up to 89%, consistently outperforming fine-tuned transformer encoder baselines. Our work provides the first empirical evidence that SAEs can be used to detect software bugs directly from the internal representations of pretrained LLMs, without any fine-tuning or task-specific supervision.

Post-training compression reduces the computational and memory costs of large language models (LLMs), enabling resource-efficient deployment. However, existing compression benchmarks only focus on language modeling (e.g., perplexity) and natural language understanding tasks (e.g., GLUE accuracy), ignoring the agentic capabilities - workflow, tool use/function call, long-context understanding and real-world application. We introduce the Agent Compression Benchmark (ACBench), the first comprehensive benchmark for evaluating how compression impacts LLMs' agentic abilities. ACBench spans (1) 12 tasks across 4 capabilities (e.g., WorfBench for workflow generation, Needle-in-Haystack for long-context retrieval), (2) quantization (GPTQ, AWQ) and pruning (Wanda, SparseGPT), and (3) 15 models, including small (Gemma-2B), standard (Qwen2.5 7B-32B), and distilled reasoning LLMs (DeepSeek-R1-Distill). Our experiments reveal compression tradeoffs: 4-bit quantization preserves workflow generation and tool use (1%-3% drop) but degrades real-world application accuracy by 10%-15%. We introduce ERank, Top-k Ranking Correlation and Energy to systematize analysis. ACBench provides actionable insights for optimizing LLM compression in agentic scenarios. The code can be found in https://github.com/pprp/ACBench.

Large Language Models (LLMs) are increasingly leveraged for translation tasks but often fall short when translating inclusive language -- such as texts containing the singular 'they' pronoun or otherwise reflecting fair linguistic protocols. Because these challenges span both computational and societal domains, it is imperative to critically evaluate how well LLMs handle inclusive translation with a well-founded framework. This paper presents FairTranslate, a novel, fully human-annotated dataset designed to evaluate non-binary gender biases in machine translation systems from English to French. FairTranslate includes 2418 English-French sentence pairs related to occupations, annotated with rich metadata such as the stereotypical alignment of the occupation, grammatical gender indicator ambiguity, and the ground-truth gender label (male, female, or inclusive). We evaluate four leading LLMs (Gemma2-2B, Mistral-7B, Llama3.1-8B, Llama3.3-70B) on this dataset under different prompting procedures. Our results reveal substantial biases in gender representation across LLMs, highlighting persistent challenges in achieving equitable outcomes in machine translation. These findings underscore the need for focused strategies and interventions aimed at ensuring fair and inclusive language usage in LLM-based translation systems. We make the FairTranslate dataset publicly available on Hugging Face, and disclose the code for all experiments on GitHub.

Large language models (LLMs) have demonstrated strong capabilities in programming and mathematical reasoning tasks, but are constrained by limited high-quality training data. Synthetic data can be leveraged to enhance fine-tuning outcomes, but several factors influence this process, including model size, synthetic data volume, pruning strategy, and number of fine-tuning rounds. We explore these axes and investigate which conditions enable model self-improvement. We introduce the Think, Prune, Train process, a scalable framework that iteratively fine-tunes models on their own reasoning traces, using ground-truth pruning to ensure high-quality training data. This approach yields improved performance: on GSM8K, Gemma2-2B achieves a Pass@1 of 57.6% (from 41.9%), Gemma2-9B reaches 82%, matching LLaMA-3.1-70B, and LLaMA-3.1-70B attains 91%, even surpassing GPT-4o, demonstrating the effectiveness of self-generated reasoning and systematic data selection for improving LLM capabilities.

Reinforcement Learning from Human Feedback (RLHF) is essential for aligning large language models (LLMs) with human values. However, RLHF is susceptible to reward hacking, where the agent exploits flaws in the reward function rather than learning the intended behavior, thus degrading alignment. While reward shaping helps stabilize RLHF and partially mitigate reward hacking, a systematic investigation into shaping techniques and their underlying principles remains lacking. To bridge this gap, we present a comprehensive study of the prevalent reward shaping methods. Our analysis suggests three key design principles: (1) RL reward is ideally bounded, (2) RL benefits from rapid initial growth followed by gradual convergence, and (3) RL reward is best formulated as a function of centered reward. Guided by these insights, we propose Preference As Reward (PAR), a novel approach that leverages the latent preferences embedded within the reward model itself as the signal for reinforcement learning. We evaluated PAR on two base models, Gemma2-2B and Llama3-8B, using two datasets, Ultrafeedback-Binarized and HH-RLHF. Experimental results demonstrate PAR's superior performance over other reward shaping methods. On the AlpacaEval 2.0 benchmark, PAR achieves a win rate at least 5 percentage points higher than competing approaches. Furthermore, PAR exhibits remarkable data efficiency, requiring only a single reference reward for optimal performance, and maintains robustness against reward hacking even after two full epochs of training. Code is available at https://github.com/PorUna-byte/PAR.

Maintaining consistent model performance across domains is a fundamental challenge in machine learning. While recent work has explored using LLM-generated data for fine-tuning, its impact on cross-domain generalization remains poorly understood. In this paper, we present a systematic analysis revealing that fine-tuning with LLM-generated data not only improves target task performance but also reduces out-of-domain (OOD) degradation compared to fine-tuning with ground truth data. Through analyzing the data sequence in tasks of various domains, we demonstrate that this enhanced OOD robustness stems from a reduced prevalence of high perplexity tokens in LLM-generated sequences. Following this hypothesis we showed that masking high perplexity tokens in ground truth training data also achieves similar OOD preservation comparable to using LLM-generated data. Extensive experiments across diverse model architectures and scales, including Gemma2-2B, Mistral-7B and Llama3-8B, corroborate the consistency of our findings. To the best of our knowledge, this work provides the first mechanistic explanation for the superior OOD robustness conferred by LLM-generated training data, offering valuable insights for developing more robust fine-tuning strategies.

The fundamental units of internal representations in large language models (LLMs) remain undefined, limiting further understanding of their mechanisms. Neurons or features are often regarded as such units, yet neurons suffer from polysemy, while features face concerns of unreliable reconstruction and instability. To address this issue, we propose the Atoms Theory, which defines such units as atoms. We introduce the atomic inner product (AIP) to correct representation shifting, formally define atoms, and prove the conditions that atoms satisfy the Restricted Isometry Property (RIP), ensuring stable sparse representations over atom set and linking to compressed sensing. Under stronger conditions, we further establish the uniqueness and exact ell_1 recoverability of the sparse representations, and provide guarantees that single-layer sparse autoencoders (SAEs) with threshold activations can reliably identify the atoms. To validate the Atoms Theory, we train threshold-activated SAEs on Gemma2-2B, Gemma2-9B, and Llama3.1-8B, achieving 99.9% sparse reconstruction across layers on average, and more than 99.8% of atoms satisfy the uniqueness condition, compared to 0.5% for neurons and 68.2% for features, showing that atoms more faithfully capture intrinsic representations of LLMs. Scaling experiments further reveal the link between SAEs size and recovery capacity. Overall, this work systematically introduces and validates Atoms Theory of LLMs, providing a theoretical framework for understanding internal representations and a foundation for mechanistic interpretability. Code available at https://github.com/ChenhuiHu/towards_atoms.